Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STAT1 ENSSSCG00000016057

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Description

signal transducer and activator of transcription 1 [Source:VGNC Symbol;Acc:VGNC:95523]

Location

Primary_assembly 15: 95,593,211-95,646,260 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 8 transcripts (splice variants), 275 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059596.3	STAT1-207	3856	856aa	ENSSSCP00000033087.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZN85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000017482.5	STAT1-204	5470	786aa	ENSSSCP00000017010.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1U1J3	-
ENSSSCT00000064095.3	STAT1-205	5371	753aa	ENSSSCP00000056805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TCU1 Q764M5	-
ENSSSCT00000054773.3	STAT1-203	4659	697aa	ENSSSCP00000039070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A5C9 A0A4X1TGX6	-
ENSSSCT00000037616.2	STAT1-208	4148	759aa	ENSSSCP00000048073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T9F7 A0A8D1H8L9	-
ENSSSCT00000053126.3	STAT1-206	2738	749aa	ENSSSCP00000052900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0Q9R8 G9BFT9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046078.3	STAT1-201	2678	714aa	ENSSSCP00000044995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AM56	-
ENSSSCT00000035522.4	STAT1-202	2496	716aa	ENSSSCP00000030977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SNQ5 A0A8D2C7C0	-

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Summary

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