Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDCA7 ENSSSCG00000015961

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Description

cell division cycle associated 7 [Source:VGNC Symbol;Acc:VGNC:95623]

Location

Primary_assembly 15: 79,432,667-79,447,568 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 4 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050837.3	CDCA7-203	3020	452aa	ENSSSCP00000035182.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZUB5 A0A8D1G0M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000017379.4	CDCA7-201	2876	426aa	ENSSSCP00000016914.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ZQZ2 F1S065	-
ENSSSCT00000044730.3	CDCA7-204	2792	373aa	ENSSSCP00000059207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BST9 A0A4X1UPH8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000042439.3	CDCA7-202	2637	331aa	ENSSSCP00000040099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UPJ8 A0A8D1YI70	-

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Summary

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