Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RAPGEF4 ENSSSCG00000015959

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Description

Rap guanine nucleotide exchange factor 4 [Source:VGNC Symbol;Acc:VGNC:95814]

Location

Primary_assembly 15: 78,773,266-79,095,040 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 6 transcripts (splice variants), 275 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017377.5	RAPGEF4-205	4789	995aa	ENSSSCP00000016912.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S067	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000075254.2	RAPGEF4-203	4771	989aa	ENSSSCP00000060389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q884	-
ENSSSCT00000068432.2	RAPGEF4-204	4765	987aa	ENSSSCP00000069009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVM4	-
ENSSSCT00000092111.1	RAPGEF4-201	4378	858aa	ENSSSCP00000080282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FM55	-
ENSSSCT00000097191.1	RAPGEF4-206	4228	992aa	ENSSSCP00000080828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FPH5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000089992.2	RAPGEF4-202	4123	866aa	ENSSSCP00000066863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8C7	-

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Summary

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