Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CSMD1 ENSSSCG00000015748

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Description

CUB and Sushi multiple domains 1 [Source:VGNC Symbol;Acc:VGNC:95600]

Location

Primary_assembly 15: 34,363,758-35,023,152 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 6 transcripts (splice variants), 219 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000101464.1	CSMD1-205	10877	3291aa	ENSSSCP00000078811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FKI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000017148.5	CSMD1-201	10778	3258aa	ENSSSCP00000016688.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RVL4	-
ENSSSCT00000091266.2	CSMD1-206	10745	3247aa	ENSSSCP00000064387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1I8	-
ENSSSCT00000093845.1	CSMD1-203	10685	3227aa	ENSSSCP00000079766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJX7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000096451.1	CSMD1-204	10505	3167aa	ENSSSCP00000081259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FQG9	-
ENSSSCT00000087531.2	CSMD1-202	10247	3081aa	ENSSSCP00000073606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R948	-

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Summary

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