Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN18 ENSSSCG00000015735

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Description

protein tyrosine phosphatase non-receptor type 18 [Source:VGNC Symbol;Acc:VGNC:96520]

Location

Primary_assembly 15: 31,945,897-31,965,753 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 2 transcripts (splice variants), 75 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017135.5	PTPN18-202	1579	454aa	ENSSSCP00000016675.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1L2C3 F1RXX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000082304.1	PTPN18-201	1179	347aa	ENSSSCP00000066063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVV7 A0A8D0ZNA1	-

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Summary

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