Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DENND5A ENSSSCG00000014578

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Description

DENN domain containing 5A [Source:VGNC Symbol;Acc:VGNC:87254]

Location

Primary_assembly 9: 268,211-357,324 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000093929.1	DENND5A-201	4120	1306aa	ENSSSCP00000075296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F7P0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000054535.3	DENND5A-202	4813	1286aa	ENSSSCP00000045602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANX8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000097333.1	DENND5A-203	4741	1262aa	ENSSSCP00000080274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLQ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000106674.1	DENND5A-204	4606	1217aa	ENSSSCP00000076353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FBX2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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