Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PKN1 ENSSSCG00000013779

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Description

protein kinase N1 [Source:VGNC Symbol;Acc:VGNC:91481]

Location

Primary_assembly 2: 64,800,721-64,824,957 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 286 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051891.3	PKN1-202	2939	956aa	ENSSSCP00000049068.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AYN9 A0A8D2BWH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000015055.5	PKN1-204	3114	944aa	ENSSSCP00000014650.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V4I5 F1SCG1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000041298.3	PKN1-203	2998	950aa	ENSSSCP00000059027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRF6 A0A4X1V693	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000015060.5	PKN1-201	2441	790aa	ENSSSCP00000014655.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AU76 F1SCF6	-

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Summary

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