Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALR ENSSSCG00000013746

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Description

calreticulin [Source:NCBI gene (formerly Entrezgene);Acc:100381266]

Gene Synonyms

CRP55, Calregulin, ERp60, HACBP

Location

Primary_assembly 2: 66,098,229-66,102,132 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants), 195 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000015020.5	CALR-201	1893	417aa	ENSSSCP00000014615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28491	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000097269.1	CALR-204	1822	383aa	ENSSSCP00000075337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T9R5 A0A8W4FAL9	-
ENSSSCT00000045310.2	CALR-202	1784	369aa	ENSSSCP00000049968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0P6 A0A4X1TBI0	-
ENSSSCT00000048882.3	CALR-203	1689	349aa	ENSSSCP00000042930.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AG29	-
ENSSSCT00000098120.1	CALR-205	1258	378aa	ENSSSCP00000076110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F9P2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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