Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM7 ENSSSCG00000013463

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Description

LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:89876]

Location

Primary_assembly 2: 76,247,058-76,252,598 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000090383.2	LSM7-202	1356	150aa	ENSSSCP00000073302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RF09 A0A8D0ZCA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000071368.2	LSM7-201	1231	103aa	ENSSSCP00000068380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VSF1 A0A5G2QW54	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000014708.5	LSM7-203	1212	102aa	ENSSSCP00000014311.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VTL5 F1S8H0	-

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Summary

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