Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPMT1 ENSSSCG00000013226

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Description

protein tyrosine phosphatase mitochondrial 1 [Source:NCBI gene (formerly Entrezgene);Acc:100514336]

Location

Primary_assembly 2: 15,043,613-15,052,831 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 2 transcripts (splice variants), 171 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014446.5	PTPMT1-201	1360	273aa	ENSSSCP00000014054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TWV9 F1SIF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087744.2	PTPMT1-202	1638	209aa	ENSSSCP00000065025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TU61 A0A5G2QLX6	-

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Summary

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