Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VBP1 ENSSSCG00000012811

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Description

VHL binding protein 1 [Source:VGNC Symbol;Acc:VGNC:104090]

Location

Primary_assembly X: 125,480,808-125,506,771 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 5 transcripts (splice variants) and 223 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000035199.4	VBP1-202	1701	234aa	ENSSSCP00000029596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T8S9 K7GNY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000081953.2	VBP1-205	1729	160aa	ENSSSCP00000059957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T8E4 A0A5G2QNT1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000085959.2	VBP1-203	1641	214aa	ENSSSCP00000059631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QMU1	-
ENSSSCT00000014004.5	VBP1-201	1526	201aa	ENSSSCP00000013620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T8T4 F1RZQ7	-
ENSSSCT00000033410.4	VBP1-204	1465	192aa	ENSSSCP00000028404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T9A9 K7GKM7	-

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Summary

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