Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PGK1 ENSSSCG00000012440

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Description

phosphoglycerate kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:407608]

Location

Primary_assembly X: 62,187,434-62,210,705 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 5 transcripts (splice variants), 285 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000013604.5	PGK1-201	2181	417aa	ENSSSCP00000013238.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W292 F1RPH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000067797.2	PGK1-203	2027	406aa	ENSSSCP00000062130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QJC3	-
ENSSSCT00000094534.1	PGK1-205	2006	399aa	ENSSSCP00000075490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8A2	-
ENSSSCT00000069139.2	PGK1-204	2003	398aa	ENSSSCP00000071183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VWX9 A0A5G2R4C4	-
ENSSSCT00000034653.4	PGK1-202	1746	400aa	ENSSSCP00000028375.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W2A2 K7GKJ8	-

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Summary

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