Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FOXP3 ENSSSCG00000012300

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Description

forkhead box P3 [Source:VGNC Symbol;Acc:VGNC:88223]

Location

Primary_assembly X: 43,303,785-43,322,968 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 4 transcripts (splice variants), 103 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000036624.4	FOXP3-202	2531	454aa	ENSSSCP00000030259.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GQT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000045253.3	FOXP3-203	2504	445aa	ENSSSCP00000049858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B120	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000032686.4	FOXP3-204	2381	404aa	ENSSSCP00000029328.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1U2F2	-
ENSSSCT00000013449.6	FOXP3-201	2111	396aa	ENSSSCP00000013089.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VMJ3 F1RW37	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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