Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASK ENSSSCG00000012253

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Description

calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]

Location

Primary_assembly X: 37,167,577-37,536,160 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 7 transcripts (splice variants), 266 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000105761.1	CASK-204	4017	954aa	ENSSSCP00000075535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000083056.2	CASK-203	3944	884aa	ENSSSCP00000072507.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RKB8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000089042.1	CASK-205	3930	925aa	ENSSSCP00000071095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAD8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000073649.1	CASK-206	3879	908aa	ENSSSCP00000060379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q877	-
ENSSSCT00000035253.3	CASK-207	3843	896aa	ENSSSCP00000030793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GSB2	-
ENSSSCT00000049875.3	CASK-202	849	162aa	ENSSSCP00000033162.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNV9	-
ENSSSCT00000066900.2	CASK-201	846	161aa	ENSSSCP00000063140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEM6	-

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Summary

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