Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HSPBAP1 ENSSSCG00000011873

.

Description

HSPB1 associated protein 1 [Source:VGNC Symbol;Acc:VGNC:98039]

Location

Primary_assembly 13: 137,740,396-137,809,527 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants), 225 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040798.2	HSPBAP1-202	5707	502aa	ENSSSCP00000052831.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B8H7 A0A8D1HDH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000012987.4	HSPBAP1-201	1802	480aa	ENSSSCP00000012645.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HF12 F1SQ37	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Summary

.

.