Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MAGI1 ENSSSCG00000011497

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Description

membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:VGNC Symbol;Acc:VGNC:98097]

Location

Primary_assembly 13: 46,897,903-47,567,717 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants), 284 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052727.3	MAGI1-205	6027	1455aa	ENSSSCP00000043634.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000054758.3	MAGI1-203	5689	1251aa	ENSSSCP00000051415.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5P8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000048160.3	MAGI1-202	5398	1155aa	ENSSSCP00000048666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AWY9	-
ENSSSCT00000045910.3	MAGI1-204	4790	1282aa	ENSSSCP00000044286.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AK60	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000012581.5	MAGI1-201	4396	1055aa	ENSSSCP00000012252.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SFS1	-

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Summary

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