Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDCP1 ENSSSCG00000011298

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Description

CUB domain containing protein 1 [Source:VGNC Symbol;Acc:VGNC:86471]

Location

Primary_assembly 13: 28,257,417-28,319,215 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants) and 265 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000085364.1	CDCP1-201	4507	838aa	ENSSSCP00000069268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYP7 A0A8D1U2A0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067842.1	CDCP1-202	5904	785aa	ENSSSCP00000063794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHG6 A0A8D0S5L4	-
ENSSSCT00000012368.6	CDCP1-204	5602	837aa	ENSSSCP00000012045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0US61 F1SRD0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000012369.5	CDCP1-203	4288	759aa	ENSSSCP00000012046.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1U272 F1SRC9	-

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Summary

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