Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC22A13 ENSSSCG00000011256

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Description

solute carrier family 22 member 13 [Source:VGNC Symbol;Acc:VGNC:92973]

Location

Primary_assembly 13: 23,120,222-23,130,829 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants), 327 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000077673.2	SLC22A13-201	1714	548aa	ENSSSCP00000073041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TY32 A0A5G2REI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000012323.4	SLC22A13-202	2699	503aa	ENSSSCP00000012001.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SJT6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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