Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PITRM1 ENSSSCG00000011157

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Description

pitrilysin metallopeptidase 1 [Source:VGNC Symbol;Acc:VGNC:95855]

Location

Primary_assembly 10: 66,996,954-67,047,235 forward strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 7 transcripts (splice variants), 232 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046612.3	PITRM1-204	6139	1081aa	ENSSSCP00000053922.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BCS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000080080.1	PITRM1-205	6139	1081aa	ENSSSCP00000065153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKU1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000055628.3	PITRM1-206	5983	1029aa	ENSSSCP00000037370.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0U2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000070950.2	PITRM1-201	3327	970aa	ENSSSCP00000065622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QUH4	-
ENSSSCT00000099289.1	PITRM1-202	3315	966aa	ENSSSCP00000077066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCM4	-
ENSSSCT00000054298.3	PITRM1-203	3252	945aa	ENSSSCP00000056989.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLP3	-
ENSSSCT00000012219.5	PITRM1-207	2566	836aa	ENSSSCP00000011906.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RX50	-

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Summary

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