Primary_assembly 10: 48,694,809-48,855,155 reverse strand.
Sscrofa11.1:CM000821.5
This gene has 7 transcripts (splice variants), 91 orthologues and 5 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000062750.2 | - | 6685 | 2031aa | ENSSSCP00000043243.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AH84 | - |
| ENSSSCT00000064510.3 | - | 6594 | 671aa | ENSSSCP00000040471.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A9J1 A0A4X1U3W0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000058945.3 | - | 6495 | 638aa | ENSSSCP00000055813.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BGU4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000102433.1 | - | 6234 | 609aa | ENSSSCP00000078825.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1U407 A0A8W4FHM7 | - |
| ENSSSCT00000038107.3 | - | 6072 | 1694aa | ENSSSCP00000049144.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AYB8 | - |
| ENSSSCT00000058596.1 | - | 5975 | 1661aa | ENSSSCP00000033068.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZNB1 | - |
| ENSSSCT00000012110.5 | - | 2342 | 738aa | ENSSSCP00000011802.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1HGV4 F1RVK1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
