Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: EPRS1 ENSSSCG00000010821

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Description

glutamyl-prolyl-tRNA synthetase 1 [Source:VGNC Symbol;Acc:VGNC:96283]

Location

Primary_assembly 10: 9,579,304-9,648,414 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043477.2	EPRS1-202	4911	1519aa	ENSSSCP00000034014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQW0 A0A4X1TS76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000011838.5	EPRS1-203	4908	1512aa	ENSSSCP00000011535.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TS71 F1S9K5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000084252.2	EPRS1-201	4685	1492aa	ENSSSCP00000073788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R930 A0A8D0R1J6	-

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Summary

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