Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PKD2L1 ENSSSCG00000010552

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Description

polycystin 2 like 1, transient receptor potential cation channel [Source:VGNC Symbol;Acc:VGNC:91473]

Location

Primary_assembly 14: 111,399,071-111,460,995 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants), 189 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000097486.1	PKD2L1-201	2578	792aa	ENSSSCP00000075418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000011544.4	PKD2L1-202	2575	791aa	ENSSSCP00000011243.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S8V0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000106753.1	PKD2L1-203	2488	762aa	ENSSSCP00000077755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FFV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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