Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOGA1 ENSSSCG00000010523

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Description

4-hydroxy-2-oxoglutarate aldolase 1 [Source:NCBI gene (formerly Entrezgene);Acc:100153961]

Gene Synonyms

DHDPSL

Location

Primary_assembly 14: 108,958,973-108,986,707 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants), 177 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011513.5	HOGA1-201	2194	344aa	ENSSSCP00000011212.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S8X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000074436.2	HOGA1-203	3858	309aa	ENSSSCP00000071768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UA32 A0A5G2R3I9	-
ENSSSCT00000073256.2	HOGA1-202	1815	164aa	ENSSSCP00000072670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RDV5 A0A8D1R8Y1	-

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Summary

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