Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VSTM4 ENSSSCG00000010385

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Description

V-set and transmembrane domain containing 4 [Source:VGNC Symbol;Acc:VGNC:94874]

Location

Primary_assembly 14: 89,650,744-89,739,269 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 4 transcripts (splice variants), 262 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000085340.1	VSTM4-203	3029	324aa	ENSSSCP00000070280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1Q4 A0A8D1E7N5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000050976.3	VSTM4-201	2362	316aa	ENSSSCP00000051607.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B545	-
ENSSSCT00000078866.2	VSTM4-202	2282	319aa	ENSSSCP00000060845.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480KSS8 A0A4X1VF25	-
ENSSSCT00000056411.3	VSTM4-204	658	191aa	ENSSSCP00000054668.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BDQ2 A0A4X1VF35	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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