Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPN4 ENSSSCG00000010358

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Description

opsin 4 [Source:VGNC Symbol;Acc:VGNC:91051]

Location

Primary_assembly 14: 87,647,238-87,658,815 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants), 259 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052092.3	OPN4-201	2392	488aa	ENSSSCP00000058369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000060711.3	OPN4-202	2359	477aa	ENSSSCP00000032418.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SEN9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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