Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ACTN2 ENSSSCG00000010144

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Description

actinin alpha 2 [Source:NCBI gene (formerly Entrezgene);Acc:100157406]

Location

Primary_assembly 14: 54,666,623-54,742,778 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 7 transcripts (splice variants), 227 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000069068.2	ACTN2-206	6160	920aa	ENSSSCP00000065015.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QLU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000011106.5	ACTN2-201	6245	894aa	ENSSSCP00000010818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XC36 F1RHL9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000085409.2	ACTN2-207	6245	894aa	ENSSSCP00000059726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QN32 A0A8D0Q9R6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000066734.2	ACTN2-205	6215	884aa	ENSSSCP00000066718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QP94 A0A8D0X9T5	-
ENSSSCT00000037537.3	ACTN2-203	6179	872aa	ENSSSCP00000047684.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AU97	-
ENSSSCT00000023830.4	ACTN2-202	6152	863aa	ENSSSCP00000021816.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LCP0	-
ENSSSCT00000061348.3	ACTN2-204	6012	870aa	ENSSSCP00000056168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BIH3	-

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Summary

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