Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC15A1 ENSSSCG00000009513

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Description

solute carrier family 15 member 1 [Source:VGNC Symbol;Acc:VGNC:92934]

Location

Primary_assembly 11: 67,652,193-67,710,933 reverse strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 7 transcripts (splice variants), 263 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010430.4	SLC15A1-201	3404	708aa	ENSSSCP00000010159.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2AB23 Q7YSA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000100268.1	SLC15A1-206	3566	707aa	ENSSSCP00000077295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FDF6	-
ENSSSCT00000072524.2	SLC15A1-202	3414	659aa	ENSSSCP00000060125.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QDJ4	-
ENSSSCT00000082286.1	SLC15A1-204	3265	695aa	ENSSSCP00000063948.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPD9 A0A8D1R3V8	-
ENSSSCT00000102369.1	SLC15A1-207	3175	665aa	ENSSSCP00000079748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLG4	-
ENSSSCT00000083482.2	SLC15A1-205	2954	696aa	ENSSSCP00000067046.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQ75	-
ENSSSCT00000078480.2	SLC15A1-203	2887	677aa	ENSSSCP00000071587.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R319	-

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Summary

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