TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
Primary_assembly 11: 47,543,815-47,828,208 reverse strand.
Sscrofa11.1:CM000822.5
This gene has 10 transcripts (splice variants), 199 orthologues and 34 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000083950.2 | TBC1D4-206 | 6922 | 1300aa | ENSSSCP00000064850.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QLE5 A0A8D1KQH1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000094672.1 | TBC1D4-207 | 6898 | 1292aa | ENSSSCP00000075975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1KQH3 A0A8W4F9M1 | - |
| ENSSSCT00000061888.3 | TBC1D4-208 | 6877 | 1285aa | ENSSSCP00000045690.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AP29 | - |
| ENSSSCT00000087065.2 | TBC1D4-203 | 6466 | 1237aa | ENSSSCP00000066302.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QN34 A0A8D1GG50 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000079364.2 | TBC1D4-204 | 6361 | 1202aa | ENSSSCP00000064706.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QRQ3 | - |
| ENSSSCT00000010375.5 | TBC1D4-205 | 6307 | 1184aa | ENSSSCP00000010105.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1RHF2 | - |
| ENSSSCT00000048526.3 | TBC1D4-202 | 6238 | 1291aa | ENSSSCP00000031881.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZK86 | - |
| ENSSSCT00000062847.3 | TBC1D4-210 | 5755 | 1148aa | ENSSSCP00000043860.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AIZ2 A0A8D1GI58 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000047613.2 | TBC1D4-201 | 5657 | 1119aa | ENSSSCP00000049770.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B036 | - |
| ENSSSCT00000010376.4 | TBC1D4-209 | 5526 | 1138aa | ENSSSCP00000010106.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1GQ45 F1RHF1 | - |
