SPT20 homolog, SAGA complex component [Source:HGNC Symbol;Acc:HGNC:20596]
Primary_assembly 11: 12,825,762-12,864,929 reverse strand.
Sscrofa11.1:CM000822.5
This gene has 7 transcripts (splice variants), 208 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000052734.1 | SUPT20H-204 | 3088 | 811aa | ENSSSCP00000034551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZSW0 A0A4X1T0I4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000095518.1 | SUPT20H-202 | 2991 | 779aa | ENSSSCP00000078277.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0SGM4 A0A8W4FG33 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000040086.3 | SUPT20H-206 | 2944 | 804aa | ENSSSCP00000042095.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ADP2 | - |
| ENSSSCT00000037044.2 | SUPT20H-207 | 2898 | 767aa | ENSSSCP00000044014.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AJF1 A0A4X1T3C6 | - |
| ENSSSCT00000060979.3 | SUPT20H-201 | 2869 | 723aa | ENSSSCP00000035347.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZUS3 A0A8D1Y8S8 | - |
| ENSSSCT00000053123.3 | SUPT20H-205 | 2724 | 685aa | ENSSSCP00000031720.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZJT3 A0A8D0M2Q3 | - |
| ENSSSCT00000010256.4 | SUPT20H-203 | 2704 | 709aa | ENSSSCP00000009989.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0WKC0 F1RS39 | - |
