Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP6 ENSSSCG00000009140

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Description

caspase 6 [Source:VGNC Symbol;Acc:VGNC:86202]

Location

Primary_assembly 8: 112,520,629-112,537,045 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 6 transcripts (splice variants), 268 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000073594.2	CASP6-206	1111	292aa	ENSSSCP00000068855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QXI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000105773.1	CASP6-204	1479	289aa	ENSSSCP00000077536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UXQ4 A0A8W4FDP3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000010008.5	CASP6-205	1332	240aa	ENSSSCP00000009746.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0K1M4 F1S131	-
ENSSSCT00000047809.3	CASP6-203	980	200aa	ENSSSCP00000052662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B811 A0A8D0QN09	-
ENSSSCT00000097858.1	CASP6-201	977	199aa	ENSSSCP00000080049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FL33	-
ENSSSCT00000099257.1	CASP6-202	466	77aa	ENSSSCP00000077592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UU59 A0A8W4FEA9	-

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Summary

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