Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAMK2D ENSSSCG00000009123

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Description

calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene (formerly Entrezgene);Acc:397674]

Location

Primary_assembly 8: 108,915,572-109,222,905 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 8 transcripts (splice variants), 99 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000078069.2	CAMK2D-206	2744	532aa	ENSSSCP00000072072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RCS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000073383.2	CAMK2D-204	3929	499aa	ENSSSCP00000064164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQ20	-
ENSSSCT00000009990.5	CAMK2D-201	3896	488aa	ENSSSCP00000009730.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F383	-
ENSSSCT00000088894.2	CAMK2D-208	3857	475aa	ENSSSCP00000061781.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QUE4	-
ENSSSCT00000087473.2	CAMK2D-207	3824	464aa	ENSSSCP00000071153.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R491	-
ENSSSCT00000070379.1	CAMK2D-203	3806	458aa	ENSSSCP00000067592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QS23	-
ENSSSCT00000074642.2	CAMK2D-205	2656	491aa	ENSSSCP00000069110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R4J6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000049835.2	CAMK2D-202	2368	477aa	ENSSSCP00000043591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHX0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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