Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCFD2 ENSSSCG00000008836

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Description

sec1 family domain containing 2 [Source:VGNC Symbol;Acc:VGNC:98301]

Location

Primary_assembly 8: 39,715,528-40,145,887 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 5 transcripts (splice variants), 231 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000023167.4	SCFD2-204	3228	684aa	ENSSSCP00000025078.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LLV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000077557.2	SCFD2-205	3093	639aa	ENSSSCP00000060121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q8C9	-
ENSSSCT00000080102.1	SCFD2-203	2762	553aa	ENSSSCP00000069878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYC0	-
ENSSSCT00000072511.1	SCFD2-202	2318	586aa	ENSSSCP00000059874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QCW1	-
ENSSSCT00000084289.2	SCFD2-201	2160	548aa	ENSSSCP00000074584.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RHD7	-

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Summary

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