Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MSX1 ENSSSCG00000008727

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Description

msh homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:100302364]

Location

Primary_assembly 8: 5,628,380-5,632,607 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 1 transcript (splice variant), 128 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009547.5	MSX1-201	1881	303aa	ENSSSCP00000009302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SJ15 F1S5G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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