Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ATL2 ENSSSCG00000008487

.

Description

atlastin GTPase 2 [Source:VGNC Symbol;Acc:VGNC:85628]

Location

Primary_assembly 3: 101,957,209-102,029,667 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 287 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064076.3	ATL2-202	3956	584aa	ENSSSCP00000048181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AWD2 A0A8D1Y4M8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000056071.1	ATL2-204	4460	553aa	ENSSSCP00000046800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASA7 A0A8D1Y4N6	-
ENSSSCT00000043618.3	ATL2-203	3863	553aa	ENSSSCP00000045245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMX6	-
ENSSSCT00000103972.1	ATL2-201	3208	412aa	ENSSSCP00000075729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MVE8 A0A8W4FA68	-
ENSSSCT00000041304.2	ATL2-205	2981	564aa	ENSSSCP00000032618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZMD2 A0A8D0K5A9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.