Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BCL11A ENSSSCG00000008392

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Description

BCL11 transcription factor A [Source:VGNC Symbol;Acc:VGNC:96562]

Location

Primary_assembly 3: 81,196,294-81,296,382 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 7 transcripts (splice variants), 213 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059747.3	BCL11A-206	3090	835aa	ENSSSCP00000058973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BS71 A0A8D1E689	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000102673.1	BCL11A-201	4694	130aa	ENSSSCP00000079097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WBR4 A0A8W4FIP1	-
ENSSSCT00000046105.3	BCL11A-205	3366	793aa	ENSSSCP00000056566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BIY8	-
ENSSSCT00000009189.4	BCL11A-207	3036	773aa	ENSSSCP00000008956.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LZA2 F2Z5U2	-
ENSSSCT00000085191.2	BCL11A-204	2779	783aa	ENSSSCP00000065052.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSS7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000039117.3	BCL11A-203	2744	774aa	ENSSSCP00000048617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AXL1 A0A8D0URU9	-
ENSSSCT00000090007.1	BCL11A-202	711	130aa	ENSSSCP00000060980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1WBS1 A0A5G2QG22	-

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Summary

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