Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ANTXR1 ENSSSCG00000008340

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Description

ANTXR cell adhesion molecule 1 [Source:VGNC Symbol;Acc:VGNC:85364]

Location

Primary_assembly 3: 73,157,747-73,398,379 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 8 transcripts (splice variants), 265 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009134.5	ANTXR1-202	2088	559aa	ENSSSCP00000008903.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SPM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000097093.1	ANTXR1-208	5469	510aa	ENSSSCP00000078923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FI72	-
ENSSSCT00000075243.2	ANTXR1-207	5397	548aa	ENSSSCP00000066537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QR59	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000049612.2	ANTXR1-206	5239	510aa	ENSSSCP00000039458.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A688 A0A8D1AGH1	-
ENSSSCT00000054445.3	ANTXR1-205	5218	524aa	ENSSSCP00000048146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AW61	-
ENSSSCT00000077889.1	ANTXR1-203	4398	554aa	ENSSSCP00000074508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBW0 A0A8D1D041	-
ENSSSCT00000070759.1	ANTXR1-204	4305	523aa	ENSSSCP00000066339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWM0 A0A8D1XSD0	-
ENSSSCT00000099694.1	ANTXR1-201	1446	345aa	ENSSSCP00000074963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F700	-

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Summary

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