RNA exonuclease 5 [Source:VGNC Symbol;Acc:VGNC:92230]
Primary_assembly 3: 25,177,693-25,238,998 reverse strand.
Sscrofa11.1:CM000814.5
This gene has 5 transcripts (splice variants), 189 orthologues and 6 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000061328.3 | REXO5-202 | 4147 | 787aa | ENSSSCP00000037615.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A111 A0A8D0TH28 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000089203.2 | REXO5-203 | 4029 | 745aa | ENSSSCP00000074472.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RDB0 A0A8D0TI06 | - |
| ENSSSCT00000074060.2 | REXO5-204 | 2671 | 786aa | ENSSSCP00000066375.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QNV5 A0A8D0THW3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000065117.2 | REXO5-205 | 2599 | 752aa | ENSSSCP00000044859.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ALT9 A0A8D0TF24 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000071668.2 | REXO5-201 | 2457 | 728aa | ENSSSCP00000061439.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QBK1 A0A8D1CP01 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
