Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CTSA ENSSSCG00000007431

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Description

cathepsin A [Source:VGNC Symbol;Acc:VGNC:96498]

Location

Primary_assembly 17: 48,082,448-48,089,971 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000077170.2	CTSA-203	1916	495aa	ENSSSCP00000071302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480LAY6 A0A8D1NL56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000054887.3	CTSA-202	2062	453aa	ENSSSCP00000032543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZM50 A0A4X1U200	-
ENSSSCT00000008134.5	CTSA-201	1865	478aa	ENSSSCP00000007918.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TWH3 F1SC70	-
ENSSSCT00000104138.1	CTSA-204	1242	387aa	ENSSSCP00000081318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FRL8	-

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Summary

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