Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RBM39 ENSSSCG00000007309

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Description

RNA binding motif protein 39 [Source:VGNC Symbol;Acc:VGNC:95711]

Location

Primary_assembly 17: 39,031,957-39,063,699 reverse strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 5 transcripts (splice variants), 284 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061882.3	RBM39-203	3446	530aa	ENSSSCP00000053421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAQ0 A0A4X1TED9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000048381.3	RBM39-205	3274	497aa	ENSSSCP00000036979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZA4 A0A8D1FQZ3	-
ENSSSCT00000007997.5	RBM39-202	2553	525aa	ENSSSCP00000007783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TD52 F2Z5I2	-
ENSSSCT00000055143.3	RBM39-204	2502	508aa	ENSSSCP00000038396.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AXU6	-
ENSSSCT00000072987.2	RBM39-201	298	94aa	ENSSSCP00000067619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TEH2 A0A5G2QTY5	-

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Summary

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