Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PSD3 ENSSSCG00000007034

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Description

pleckstrin and Sec7 domain containing 3 [Source:VGNC Symbol;Acc:VGNC:107166]

Location

Primary_assembly 17: 12,758,536-13,264,174 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 4 transcripts (splice variants), 172 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000088386.1	PSD3-204	5114	1055aa	ENSSSCP00000065600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNH6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000028117.4	PSD3-201	6288	510aa	ENSSSCP00000019624.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0KAU8 I3L6H3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000046428.3	PSD3-203	3363	978aa	ENSSSCP00000043434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHS5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000090181.2	PSD3-202	3346	1033aa	ENSSSCP00000067367.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QR22	-

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Summary

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