Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYCP1 ENSSSCG00000006750

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Description

synaptonemal complex protein 1 [Source:VGNC Symbol;Acc:VGNC:93654]

Location

Primary_assembly 4: 105,591,743-105,730,398 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 2 transcripts (splice variants) and 179 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007395.5	SYCP1-201	4059	952aa	ENSSSCP00000007200.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1QHA2 F1SBS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000072321.2	SYCP1-202	3984	927aa	ENSSSCP00000066651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7S6 A0A8D1KHX8	-

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Summary

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