Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VTCN1 ENSSSCG00000006731

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Description

V-set domain containing T cell activation inhibitor 1 [Source:VGNC Symbol;Acc:VGNC:94878]

Location

Primary_assembly 4: 103,412,571-103,584,683 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007374.5	VTCN1-202	2622	282aa	ENSSSCP00000007179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AWN0 F1SAY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000073364.1	VTCN1-204	4713	271aa	ENSSSCP00000072292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R5D7 A0A8D0UM26	-
ENSSSCT00000078908.2	VTCN1-203	2274	166aa	ENSSSCP00000061065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q9R2 A0A8D0WHN9	-
ENSSSCT00000076301.2	VTCN1-201	463	87aa	ENSSSCP00000064148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SUH5 A0A5G2QH85	-

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Summary

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