Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PHGDH ENSSSCG00000006717

.

Description

phosphoglycerate dehydrogenase [Source:NCBI gene (formerly Entrezgene);Acc:100144529]

Location

Primary_assembly 4: 101,444,693-101,478,144 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 6 transcripts (splice variants), 224 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070061.2	PHGDH-203	1875	574aa	ENSSSCP00000063129.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QH33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000007358.3	PHGDH-201	1904	533aa	ENSSSCP00000007163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481BII5 A5GFY8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000091229.1	PHGDH-206	1773	482aa	ENSSSCP00000061464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QBP3	-
ENSSSCT00000082240.2	PHGDH-204	1665	504aa	ENSSSCP00000063688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNM6	-
ENSSSCT00000086091.1	PHGDH-205	1640	445aa	ENSSSCP00000070498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8P8	-
ENSSSCT00000033073.4	PHGDH-202	1632	493aa	ENSSSCP00000029356.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GNA5	-

.

Summary

.

.