Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTSS ENSSSCG00000006648

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Description

cathepsin S [Source:VGNC Symbol;Acc:VGNC:87079]

Location

Primary_assembly 4: 98,417,883-98,442,950 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 8 transcripts (splice variants), 269 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007284.5	CTSS-205	1422	331aa	ENSSSCP00000007089.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SEC1 F1SS93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000067415.1	CTSS-201	3317	304aa	ENSSSCP00000060349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q855 A0A8D0MFM3	-
ENSSSCT00000007283.4	CTSS-206	1389	320aa	ENSSSCP00000007088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F3B0 A0A4X1SEU0	-
ENSSSCT00000040157.3	CTSS-203	1302	320aa	ENSSSCP00000058317.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BNW9 A0A4X1SEB6	-
ENSSSCT00000090649.2	CTSS-207	1272	281aa	ENSSSCP00000060467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SEC2 A0A5G2Q960	-
ENSSSCT00000098752.1	CTSS-208	1210	255aa	ENSSSCP00000076377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAT2	-
ENSSSCT00000103397.1	CTSS-204	1147	240aa	ENSSSCP00000080007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLC2	-
ENSSSCT00000093666.1	CTSS-202	745	215aa	ENSSSCP00000080772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FNK3	-

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Summary

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