Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CADM3 ENSSSCG00000006415

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Description

cell adhesion molecule 3 [Source:VGNC Symbol;Acc:VGNC:86135]

Location

Primary_assembly 4: 91,227,363-91,260,097 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042275.3	CADM3-202	2514	430aa	ENSSSCP00000033904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQM3 A0A4X1VVL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000053737.3	CADM3-203	3464	396aa	ENSSSCP00000044483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AKF6 A0A4X1VXB6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000079356.2	CADM3-201	1330	363aa	ENSSSCP00000060647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QF38 A0A8D1CQH6	-

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Summary

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