Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SELL ENSSSCG00000006287

.

Description

selectin L [Source:NCBI gene (formerly Entrezgene);Acc:100127147]

Location

Primary_assembly 4: 81,306,353-81,326,444 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 3 transcripts (splice variants), 86 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006888.6	SELL-202	2548	387aa	ENSSSCP00000006700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A288CG53 A0A8D1GWC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000067577.2	SELL-203	2545	384aa	ENSSSCP00000066288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UXY9 A0A5G2QWH2	-
ENSSSCT00000082922.2	SELL-201	1281	371aa	ENSSSCP00000066926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYA4 A0A8D0TDE5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Summary

.

.