Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: ATP6V1H ENSSSCG00000006263

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Description

ATPase H+ transporting V1 subunit H [Source:VGNC Symbol;Acc:VGNC:85677]

Location

Primary_assembly 4: 77,211,493-77,302,162 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006862.4	ATP6V1H-204	1799	483aa	ENSSSCP00000006676.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0PCE0 F1RSG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000077903.2	ATP6V1H-203	1961	465aa	ENSSSCP00000069299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T7C9 A0A5G2QWH1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000032060.4	ATP6V1H-202	1943	451aa	ENSSSCP00000026291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LQB3	-
ENSSSCT00000067524.2	ATP6V1H-201	1592	443aa	ENSSSCP00000073626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T5R6 A0A5G2R3Q7	-

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Summary

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