Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PABPC1 ENSSSCG00000006063

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Description

poly(A) binding protein cytoplasmic 1 [Source:VGNC Symbol;Acc:VGNC:98829]

Location

Primary_assembly 4: 36,209,164-36,228,073 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants), 113 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000032533.4	PABPC1-204	2853	633aa	ENSSSCP00000026891.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z557	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000100160.1	PABPC1-201	2459	604aa	ENSSSCP00000077259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCY5	-
ENSSSCT00000046615.3	PABPC1-202	2444	599aa	ENSSSCP00000037095.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZL8	-
ENSSSCT00000105799.1	PABPC1-203	2417	590aa	ENSSSCP00000077530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGU2	-

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Summary

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