Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRHL2 ENSSSCG00000006060

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Description

grainyhead like transcription factor 2 [Source:VGNC Symbol;Acc:VGNC:88667]

Location

Primary_assembly 4: 35,371,136-35,564,919 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 3 transcripts (splice variants), 274 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000072827.1	GRHL2-202	5087	626aa	ENSSSCP00000070652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2T4 A0A8D0T744	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000006649.3	GRHL2-203	5022	624aa	ENSSSCP00000006470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IQF5 F1S0Q6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000059239.3	GRHL2-201	1662	553aa	ENSSSCP00000034591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZSG1 A0A8D1ILD2	-

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Summary

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