Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL5A1 ENSSSCG00000005751

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Description

collagen type V alpha 1 chain [Source:NCBI gene (formerly Entrezgene);Acc:397533]

Location

Primary_assembly 1: 273,971,971-274,085,111 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 1 transcript (splice variant), 222 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006323.5	COL5A1-201	7960	1918aa	ENSSSCP00000006161.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S021	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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